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Blast your Sequence
Help us improve the primary database. What do you think and where should we go in the future:
https://www.surveymonkey.com/s/RK3GMPC
?
search databases:
GabiPD public
GabiPD Arabidopsis thaliana
Arabidopsis TAIR 10.0 cDNA
Arabidopsis TAIR 10.0 CDS
Arabidopsis TAIR 10.0 Genomic
Populus trichocarpa Phytozome 2.0 cDNA
Populus trichocarpa Phytozome 2.0 CDS
Populus trichocarpa Phytozome 2.0 Genomic
Populus trichocarpa scaffold sequences
Populus trichocarpa scaffold sequences with RepeatMasker
Oryza sativa subsp. japonica TIGR 5.0 cDNA
Oryza sativa subsp. japonica TIGR 5.0 CDS
Oryza sativa subsp. japonica TIGR 5.0 Genomic
Chlamydomonas reinhardtii JGI/DOE 3.1 cDNA
Chlamydomonas reinhardtii JGI/DOE 3.1 CDS
Chlamydomonas reinhardtii JGI/DOE 3.1 Genomic
GabiPD Hordeum vulgare
GabiPD Beta vulgaris
GabiPD Brassica napus
GabiPD Solanum tuberosum
Gabi clones Arabidopsis
Gabi clones Hordeum vulgare
Gabi T-DNA Arabidopsis thaliana
GabiPD Rye Assemblies
GabiPD H. vulgare (Betzes) sorted Chromosomes
database information
program:
PROTEIN query -> TRANSLATED database [tblastn]
NUCLEOTIDE query -> PROTEIN database [blastx]
NUCLEOTIDE query -> NUCLEOTIDE database [blastn]
TRANSLATED query -> TRANSLATED database [tblastx]
PROTEIN query -> PROTEIN database [blastp]
expect Value:
1e-40
1e-30
1e-20
1e-15
1e-10
1e-9
1e-8
1e-7
1e-6
1e-5
1e-4
1e-3
1e-2
1e-1
1e-0
max alignments:
10
25
50
100
250
Matrix:
BLOSUM45
BLOSUM62
BLOSUM80
PAM30
PAM70
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